BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E12LP1|AL428571
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1652 0.0
3x_Contig180 179 8e-45
>3x_Contig1805
Length = 19369
Score = 1652 bits (830), Expect = 0.0
Identities = 852/860 (99%), Gaps = 2/860 (0%)
Strand = Plus / Plus
Query: 1 atgacatcagtttgatcttagaacacttcgtacaacttttaggattttcattttttctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3731 atgacatcagtttgatcttagaacacttcgtacaacttttaggattttcattttttctaa 3790
Query: 61 ttgcgtttctcaaaacgaacgtactttccgctgcagtgatggatagagcaggacaatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3791 ttgcgtttctcaaaacgaacgtactttccgctgcagtgatggatagagcaggacaatttc 3850
Query: 121 tcttattatgaggcaaataaccatgtcacagaatcgtgaagacacctgctgtgtaactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3851 tcttattatgaggcaaataaccatgtcacagaatcgtgaagacacctgctgtgtaactgt 3910
Query: 181 ctgcaactttgaatgctcagtcaaacctttcaacctggcaagacgcactttcagccaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3911 ctgcaactttgaatgctcagtcaaacctttcaacctggcaagacgcactttcagccaacc 3970
Query: 241 gtggcaactgaggttgtacggtcgcccacaaaaaaaaacggaagtaaagatttctcggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3971 gtggcaactgaggttgtacggtcgcccacaaaaaaaaacggaagtaaagatttctcggaa 4030
Query: 301 caaaaatagaaacaagaaacattcctcgaaagatctacaaacgtttttcattgctgctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4031 caaaaatagaaacaagaaacattcctcgaaagatctacaaacgtttttcattgctgctgg 4090
Query: 361 agttattcttgcgcttgtgttattgcmatatcaaacgtgctttgctttttttttttttgg 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4091 agttattcttgcgcttgtgttattgcaatatcaaacgtgctttgctttttttttttttgg 4150
Query: 421 tttttcgtttcctgtttttctttccaatcttcattctttgtgcgtcgtgcatagaaaaar 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4151 tttttcgtttcctgtttttctttccaatcttcattctttgtgcgtcgtgcatagaaaaaa 4210
Query: 481 attgcatgtccaatctgtcgatctaggtatttcgaaaagrtctacgc-gaaaaatgcagc 539
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 4211 attgcatgtccaatctgtcgatctaggtatttcgaaaagatctacgcagaaaaatgcagc 4270
Query: 540 tctgcccattcaaatgcccgtacttwggggcagtgataacaaaataaagaraaattccgg 599
||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct: 4271 tctgcccattcaaatgcccgtacttaggagcagtgataacaaaataaagaaaaattccgg 4330
Query: 600 cttcggatagaacccaagtgtcggatttggaatttctttattccaaagctttgttcttta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4331 cttcggatagaacccaagtgtcggatttggaatttctttattccaaagctttgttcttta 4390
Query: 660 gcttagaatggccttttatgcagctcttttaaaaaaaaagatgggtttagcaggtcagtc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4391 gcttagaatggccttttatgcagctcttttaaaaaaaaagatgggtttagcaggtcagtc 4450
Query: 720 taagggaacaaagcttttatctgtgtctgagctgaaaggctcttgtttgccattgaacac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4451 taagggaacaaagcttttatctgtgtctgagctgaaaggctcttgtttgccattgaacac 4510
Query: 780 aggttctgggaggattactgcatgcttgacaataaccaactccaccagtctccaaaaact 839
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4511 aggttct-ggaggattactgcatgcttgacaataaccaactccaccagtctccaaaaact 4569
Query: 840 caaaaagttgatttacatac 859
||||||||||||||||||||
Sbjct: 4570 caaaaagttgatttacatac 4589
>3x_Contig180
Length = 1260
Score = 179 bits (90), Expect = 8e-45
Identities = 431/544 (79%), Gaps = 3/544 (0%)
Strand = Plus / Minus
Query: 273 aaaaaacggaagtaaagatttctcggaacaaaaatagaaacaagaaacattcctcgaaag 332
|||||| |||||||||||||| | |||| ||||||||||| |||||| ||| | |||||
Sbjct: 1184 aaaaaaaggaagtaaagatttataggaaaaaaaatagaaaaaagaaaaattaatagaaag 1125
Query: 333 atctacaaacgtttttcattgctgctggagttattcttgcgcttgtgttattgcmatatc 392
|| || ||| |||||| || | | |||||| | | ||| | ||||||||| | ||||
Sbjct: 1124 atataaaaaagtttttaatagaagatggagtaaatattgagattgtgttatagaaatata 1065
Query: 393 aaacgtgctttgctttttttttttttggtttttcgtttcctgtttttctttccaatcttc 452
||| ||| |||| |||||||||||||||||||| |||| ||||||| ||| ||| ||
Sbjct: 1064 aaaagtgatttgatttttttttttttggtttttagtttaatgtttttatttaaaatatta 1005
Query: 453 attctttgtgcgtcgtgcatagaaaaarattgcatgtccaatctgtcgatctagg-tatt 511
||| |||||| || ||| ||||||||| |||| |||| ||| ||| ||| |||| ||||
Sbjct: 1004 attatttgtgagtagtgaatagaaaaaaattgaatgtaaaatatgtagatataggatatt 945
Query: 512 tcgaaaagrtctacgc-gaaaaatgcagctctgcccattcaaatgcccgtacttwggggc 570
| |||||| | || | |||||||| || | || ||| ||||| ||| || || |
Sbjct: 944 tagaaaagatataagaagaaaaatgaagatatgaaaattaaaatgaaagtaattaggaga 885
Query: 571 agtgataacaaaataaagaraaattccggcttcggatagaacccaagtgtcggatttgga 630
|||||||| |||||||||| ||||| || || |||||||| |||||| |||||||||
Sbjct: 884 agtgataaaaaaataaagaaaaattaaggattaggatagaaaaaaagtgtaggatttgga 825
Query: 631 atttctttattccaaagctttgttctttagcttagaatggccttttatgcagctctttta 690
|||| |||||| |||| |||||| ||||| ||||||||| | ||||| || | | |||
Sbjct: 824 atttatttattaaaaagatttgttatttagattagaatggaatattatgaagatatatta 765
Query: 691 aaaaaaaagatgggtttagcaggtcagtctaagggaacaaagcttttatctgtgtctgag 750
||||||||||||||||||| |||| ||| |||||||| |||| | |||| ||||| ||||
Sbjct: 764 aaaaaaaagatgggtttagaaggtaagtataagggaaaaaagatattatatgtgtatgag 705
Query: 751 ctgaaaggctcttgtttgccattgaacacaggttctgggaggattactgcatgcttgaca 810
||||||| | ||||||| |||||| | ||||| | ||||||||| || ||| |||| |
Sbjct: 704 atgaaaggatattgtttgaaattgaaaaaaggttat-ggaggattaatgaatgattgaaa 646
Query: 811 ataa 814
||||
Sbjct: 645 ataa 642
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,093
Number of Sequences: 1807
Number of extensions: 15093
Number of successful extensions: 214
Number of sequences better than 1.0e-20: 2
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)